generate_inventory

Generate file_inventory.csv from current sourcedata contents.

Walks sourcedata/{subject}/{session}/behavioral/ and eyetracking/ directories, classifies each file, and maps it to a BIDS destination with the correct prefixed task names (TBencoding, NATencoding, FINretrieval, etc.).

Usage: python generate_inventory.py [–output file_inventory.csv]

Source: src/python/raw2bids_converters/generate_inventory.py

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Functions

bids_sub

bids_sub(num)

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bids_ses

bids_ses(num)

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classify_cued_recall_file

Classify a cued recall behavioral file.

classify_cued_recall_file(filename, subj_num, bids_ses_num)

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classify_free_recall_behavioral

Classify a free recall session behavioral file.

classify_free_recall_behavioral(filename, subj_num, bids_ses_num)

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classify_eyetracking_file

Classify an eyetracking file (EDF, AOI, or audio).

classify_eyetracking_file(filename, subj_num, bids_ses_num, subdir = '')

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classify_final_session_file

Classify a final session (ses-30) file.

classify_final_session_file(filename, subj_num, subdir)

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determine_bids_session

Determine session type from BIDS session number.

determine_bids_session(ses_num)

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walk_subject

Walk all sessions for a subject and classify files.

walk_subject(subj_num)

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